Cytoscape is an open source software platform for visualizing molecular interaction networks and biological pathways and integrating these networks with annotations, gene expression profiles and other state data. Although Cytoscape was originally designed for biological research, now it is a general platform for complex network analysis and visualization. Cytoscape core distribution provides a basic set of features for data integration, analysis, and visualization.

Abstract Algebra: Theory and Applications

The first half of the book presents group theory, through the Sylow theorems, with enough material for a semester-long course. The second-half is suitable for a second semester and presents rings, integral domains, Boolean algebras, vector spaces, and fields, concluding with Galois Theory.

Magic is a Game

This is a topic a lot of people have been asking me about (I’ve been getting emails like crazy). When I have time, I’ll write a more formal posting, but this is a conversation I had on reddit on this. The conversation has been redacted and cleaned up for clarity and relevancy. I wrote: …I don’t have, nor really believe in, a Great Work. I’m working on an article on this, but, from my perspective, magic is a type of game. Trying to come up with a theory of magic is like trying to come up with a theory of Read More

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